Rawal Lab's: Research Articles

1. AI in NSCLC: PET-CT & histology model.

Author(s): Ullas Batra, Shrinidhi Nathany, Swarsat Kaushik Nath, Joslia T Jose, Robin Sinha, Preeti P, Trapti Sharma, Sunil Pasricha, Mansi Sharma, Abhishek Bansal, Kamal Rawal

Citation:

Ullas Batra, Shrinidhi Nathany, Swarsat Kaushik Nath, Joslia T Jose, Robin Sinha, Preeti P, Trapti Sharma, Sunil Pasricha, Mansi Sharma, Abhishek Bansal, and Kamal Rawal. AI in NSCLC: PET-CT & histology model. Journal of Clinical Oncology 2022 40:16_suppl, e21044-e21044 DOI: 10.1200/JCO.2022.40.16_suppl.e21044

2. An In-Silico Approach for Analysing the interplay of Hepatitis B viral X protein with Human Adaptin protein.

Author(s): Prachie SHARMA, Kapila KUMAR, Kamal Rawal

Citation:

Sharma P, Kumar K, Rawal K. An In-Silico Approach for Analysing the interplay of Hepatitis B viral X protein with Human Adaptin protein. J Res Pharm. 2022; 26(3): 483-493.

3. Biomedical text mining of obesity, diabetes and hypertension genes.

Author(s): Jaisri Jagannadham, Hitesh Kumar Jaiswal, Stuti Agrawal, Kamal Rawal

Citation:

Jagannadham, Jaisri & Jaiswal, H.K. & Agrawal, S. & Rawal, Kamal. (2015). Biomedical text mining of obesity, diabetes and hypertension genes. International Journal of Pharmaceutical Sciences Review and Research. 33. 182-186.

4. Clinical Characteristics and Remedy Profiles of Patients with COVID-19: A Retrospective Cohort Study.

Author(s): Bipin Jethani, Meeta Gupta, Parul Wadhwani, Rekha Thomas, Thankaraj Balakrishnan, George Mathew, Mohit Mathur, Bachha Pompi Rao, Dhananjay Shukla, Aashima Khullar, Meghna Khera, Himani Sharma, Ravinder Kumar, Sudeep Kumar, Sayami Jaggi, Robin Sinha, Kamal Rawal, Anu Kapoor, Raj Kumar Manchanda

Citation:

Jethani B, Gupta M, Wadhwani P, Thomas R, Balakrishnan T, Mathew G, Mathur M, Rao BP, Shukla D, Khullar A, Khera M, Sharma H, Kumar R, Kumar S, Jaggi S, Sinha R, Rawal K, Kapoor A, Manchanda RK. Clinical Characteristics and Remedy Profiles of Patients with COVID-19: A Retrospective Cohort Study. Homeopathy. 2021 May;110(2):86-93. doi: 10.1055/s-0040-1718584. Epub 2021 Feb 10. PMID: 33567460.

5. Comparative Characterization of Cardiac Development Specific microRNAs: Fetal Regulators for Future

Author(s): Yashika Rustagi, Hitesh K. Jaiswal, Kamal Rawal, Gopal C. Kundu, Vibha Rani

Citation:

Rustagi Y, Jaiswal HK, Rawal K, Kundu GC, Rani V. Comparative Characterization of Cardiac Development Specific microRNAs: Fetal Regulators for Future. PLoS One. 2015 Oct 14;10(10):e0139359. doi: 10.1371/journal.pone.0139359. PMID: 26465880; PMCID: PMC4605649.

6. Comprehensive Map of Molecules Implicated in Obesity

Author(s):Jaisri Jagannadham, Hitesh Kumar Jaiswal, Kamal Rawal

Citation:

Jagannadham J, Jaiswal HK, Agrawal S, Rawal K (2016) Comprehensive Map of Molecules Implicated in Obesity. PLoS ONE 11(2): e0146759. https://doi.org/10.1371/journal.pone.0146759

7. Deciphering relationships in disease networks using computational approaches: Fatty liver, PCOD, osteoarthritis, cholelithiasis & hyperlipdemia

Author(s):Jaisri Jagannadham, Hitesh Kumar Jaiswal, Stuti Agrawal, Kamal Rawal

Citation:

Jagannadham, Jaisri & Jaiswal, H.K. & Rawal, Kamal. (2015). Deciphering relationships in disease networks using computational approaches: Fatty liver, PCOD, osteoarthritis, cholelithiasis & hyperlipdemia. International Journal of PharmTech Research. 8. 127-134.

8. Detecting motifs and patterns at mobile genetic element insertion site

Author(s):Bhuvan Bhaskar Dev, Aman Malik, Kamal Rawal

Citation:

Dev BB, Malik A, Rawal K. Detecting motifs and patterns at mobile genetic element insertion site. Bioinformation. 2012;8(16):777-86. doi: 10.6026/97320630008777. Epub 2012 Aug 24. PMID: 23055629; PMCID: PMC3449389.

9. Distribution of MGEs and their insertion sites in the Macaca mulatta genome

Author(s): Kamal Rawal, Avantika Priya, Aman Malik, Radhika Bahl & Ram Ramaswamy

Citation:

Rawal K, Priya A, Malik A, Bahl R, Ramaswamy R. Distribution of MGEs and their insertion sites in the Macaca mulatta genome. Mob Genet Elements. 2012 May 1;2(3):133-141. doi: 10.4161/mge.21074. PMID: 23061019; PMCID: PMC3463469.

10. Genome-wide analysis of mobile genetic element insertion sites

Author(s): Kamal Rawal, Ram Ramaswamy

Citation:

Rawal K, Ramaswamy R. Genome-wide analysis of mobile genetic element insertion sites. Nucleic Acids Res. 2011 Sep 1;39(16):6864-78. doi: 10.1093/nar/gkr337. Epub 2011 May 23. PMID: 21609951; PMCID: PMC3167599.

11. High AU content: a signature of upregulated miRNA in cardiac diseases

Author(s): Richa Gupta, Neha Soni, Purbasa Patnaik, Ishita Sood, Rahul Singh, Kamal Rawal, Vibha Rani

Citation:

Gupta R, Soni N, Patnaik P, Sood I, Singh R, Rawal K, Rani V. High AU content: a signature of upregulated miRNA in cardiac diseases. Bioinformation. 2010 Sep 20;5(3):132-5. doi: 10.6026/97320630005132. PMID: 21364793; PMCID: PMC3040488.

12. Identifcation of vaccine targets in pathogens and design of a vaccine using computational approaches.

Author(s): Kamal Rawal, Robin Sinha, Bilal Ahmed Abbasi, Amit Chaudhary, Swarsat Kaushik Nath, Priya Kumari, P. Preeti, Devansh Saraf, Shachee Singh, Kartik Mishra, PranjayGupta, Astha Mishra, Trapti Sharma, Srijanee Gupta, Prashant Singh, Shriya Sood1, Preeti Subramani, Aman Kumar Dubey, Ulrich Strych, Peter J. Hotez, Maria Elena Bottazzi

Citation:

Rawal, K., Sinha, R., Abbasi, B.A. et al. Identification of vaccine targets in pathogens and design of a vaccine using computational approaches. Sci Rep 11, 17626 (2021). https://doi.org/10.1038/s41598-021-96863-x

13. Identification and characterization of MGEs and their insertion sites in the gorilla genome

Author(s): Kamal Rawal, Sangey Dorji, Amit Kumar, Anwesha Ganguly & Ankit Singh Grewal

Citation:

Kamal Rawal, Sangey Dorji, Amit Kumar, Anwesha Ganguly & Ankit Singh Grewal (2013) Identification and characterization of MGEs and their insertion sites in the gorilla genome, Mobile Genetic Elements, 3:4, DOI: 10.4161/mge.25675

14. Identification of insertion hot spots for non-LTR retrotransposons: computational and biochemical application to Entamoeba histolytica

Author(s): Prabhat K. Mandal, Kamal Rawal, Ram Ramaswamy, Alok Bhattacharya, Sudha Bhattacharya

Citation:

Prabhat K. Mandal, Kamal Rawal, Ram Ramaswamy, Alok Bhattacharya, Sudha Bhattacharya, Identification of insertion hot spots for non-LTR retrotransposons: computational and biochemical application to Entamoeba histolytica, Nucleic Acids Research, Volume 34, Issue 20, 1 November 2006, Pages 5752–5763, https://doi.org/10.1093/nar/gkl710

15. Identification of vaccine targets & design of vaccine against SARS-CoV-2 coronavirus using computational and deep learning-based approaches

Author(s): Bilal Ahmed Abbasi, Devansh Saraf, Trapti Sharma, Robin Sinha, Shachee Singh, Shriya Sood, Pranjay Gupta, Akshat Gupta, Kartik Mishra, Priya Kumari and Kamal Rawal

Citation:

Abbasi BA, Saraf D, Sharma T, Sinha R, Singh S, Sood S, Gupta P, Gupta A, Mishra K, Kumari P, Rawal K. 2022. Identification of vaccine targets & design of vaccine against SARS-CoV-2 coronavirus using computational and deep learning-based approaches. PeerJ 10:e13380 DOI 10.7717/peerj.13380

16. The LINEs and SINEs of Entamoeba histolytica: Comparative analysis and genomic distribution

Author(s): Abhijeet A. Bakre, Kamal Rawal, Ram Ramaswamy, Alok Bhattacharya, Sudha Bhattacharya

Citation:

Abhijeet A. Bakre, Kamal Rawal, Ram Ramaswamy, Alok Bhattacharya, Sudha Bhattacharya, The LINEs and SINEs of Entamoeba histolytica: Comparative analysis and genomic distribution, Experimental Parasitology, Volume 110, Issue 3, 2005, Pages 207-213, ISSN 0014-4894, https://doi.org/10.1016/j.exppara.2005.02.009.

17. Vaxi-DL: A web-based deep learning server to identify potential vaccine candidates

Author(s): Kamal Rawal, Robin Sinha, Swarsat Kaushik Nath, Preeti P., Priya Kumari, Srijanee Gupta, Trapti Sharma, Ulrich Strych, Peter Hotez, Maria Elena Bottazzi

Citation:

Kamal Rawal, Robin Sinha, Swarsat Kaushik Nath, P. Preeti, Priya Kumari, Srijanee Gupta, Trapti Sharma, Ulrich Strych, Peter Hotez, Maria Elena Bottazzi, Vaxi-DL: A web-based deep learning server to identify potential vaccine candidates, Computers in Biology and Medicine, Volume 145, 2022, 105401, ISSN 0010-4825, https://doi.org/10.1016/j.compbiomed.2022.105401.

RESEARCH PAPERS